Archives
2019

Increase in the stiffness of focal molecule complex depending on talin in the early formation process
Nobuhiko Nakao
2018

Mechanical approach to understand variety and robustness in morphogenesis
Hironori Takeda

Increase in the stiffness of focal molecule complex required talin in the initial formation process
Nobuhiko Nakao

Reconstitution of epithelial-endothelial bilayer structure using a microfabricated artificial basement membrane
Yuya Osonoi

Mathematical model of collective cell migration during somitogenesis in zebrafish
Hitoshi Saigo
2017

Mechanisms of 3D morphogenesis of insects by folding and unfolding
Itsuki Tateo

Phase reduction theory on multiple cells synchronization of gene expression rhythm
Ryotaro Shima

Brownian dynamics simulation of molecular diffusion inside a dendritic spine
Atsushi Matsuda

Evaluation of the required time for living cells to form nano-adhesive structures using AFM
Sakurako Shimizu
2015

Characterization of drugs for osteoporosis by using a mechano-biochemical simulator of bone metabolism
Kei Imai

Uniformization of cell shape in tissue by mechano-feedback leads to smooth surface maintenance of growing epithelial tissue
Yoshihide Enomoto
2014

The mechanism for sensing micro-grooved structure in cell migration: The effect of distribution of adhesions
Kensuke Suzuki

4D imaging for formation of optic vesicle derived from mES cells
Takaaki Tanaka

Investigation of interaction mechanisms between Wnt signaling regulators and their receptor by using AFM
Takato Tamaki

Mechanism of forming epithelial folding during organogenesis
Tadashi Watanabe

Modeling and simulation of mechanosensing-signaling coupled bone adaptation
Kei Imai

AFM molecular interaction measurement between adherens junction molecules
Yuki Hirohashi

Fluorescence imaging and morpholometry of osteocytes within tissue
Nobushige Fujii

Theoretical analysis of effect of molecular time constant on oscillating gene expression
Shinji Taniguchi

Chemical modification to microelectrode by conducting polymer for evaluating cardiotoxicity
Masamune Nakayama

Inkjet printing of mouse ES cells for formation of embryoid bodies
Taiki Ohmichi
2013

Molecular mechanism of cofilin-actin interaction change by filament tension
Tetsuya Fujii

AFM nanofishing of intercellular mechanosensor molecules
Koichiro Maki

Simulation of tensile loading on protein including α-helix structure
Kohei Ohto

Influence of the biochemical factors on the formation of optic cup from mES cells
Takaaki Tanaka

Interaction measurement between Wnt signal receptor and its regulator using AFM
Takato Tamaki

Examination of the contribution of cell proliferation and apical contraction on epithelial tissue deformation by using a multi-cell dynamics simulation
Tadashi Watanabe

Influences of RANKL expression rate on trabecular morphological change
Kei Imai

Morphologic change of the osteocyte network in a calvaria of embryonic chick
Nobushige Fujii

Modeling mechanosensing/signaling coupled trabecular/osteonal adaptation
Kentaro Takenaka

mRNA expression of mechanically stimulated mouse ES cells
Hiroshi Fujimoto

Simulation of multicellular dynamics with phase propagation of oscillating gene expression
Akeyama Yuki

AFM measurement of the kinesin head-microtubule interaction
Takuro Sugimoto

Time-series analysis of energy states in cofilactin filament
Yoshihiro Nakamura

Evaluation of mechanical properties of molecular mechanosensor in focal adhesion using AFM
Kento Nishina
2012

Nonlinear finite element analysis for biological soft tissues
Naoki Kida

Modeling of signaling system in trabecular bone adaptation
Kentaro Takenaka

Energy analysis of cofilin-decorated actin filament using MD simulation
Tetsuya Fujii

Evaluation of mechanical properties of osteocytes by AFM
Takato Tamaki

Mechanical simulation of multicellular tissue morphogenesis considering diffusible biochemical factor
Tadashi Watanabe

Multicellular Biomechanical Simulation of Tissue Morphogenesis
Satoru Okuda

MD analysis of tensile force induced conformational change of F-actin.
Yoshiaki Kondo

Development of Actin Filament and Actin Binding Protein Interaction Measurements Method Using an AFM
Kyohei Morita
2011

Multicellular dynamics during tissue morphogenesis
Satoru Okuda

Investigation of mechanical behavior of the actin subunits using MD simulation
Yoshiaki Kondo

In vitro experiment for analyzing neuronal migration
Kensuke Suzuki

Development of Actin Dynamics Measurement Method Using an AFM
Kyohei Morita

Bone remodeling simulation focused on bone remodeling cycle
Kentaro Takenaka

MD simulation analysis of structural change in actin filament caused by cofilin binding
Tetsuya Fujii

Evaluation for mechanical properties of nanospring protein using AFM
Koichiro Maki

Molecular dynamics analysis of actin filament under tensile force
Shinji Matsushita

Bone remodeling simulation based on mechanical and biochemical signal
Hiroki Ishibashi

Simulation of Mechanical Behavior of Cytoplasm and Contractile Ring Using Mathematical Model of Cytokinesis
Koji Nakagawa

Characteristics of nitric oxide production in mechanically stimulated osteocytes
Masaaki Murata

Secret
Yosuke Fujii
2010

Molecular dynamics analysis of actin filament under tensile force
Shinji Matsushita

Morphological dynamics simulation of multicellular tissue
Satoru Okuda

Trabecular remodeling simulation considering signaling pathways
Hiroki Ishibashi

Simulation of structural change in the actomyosin filamentous system using coarse-grained molecular dynamics model
Koji Nakagawa

Force dependence of nitric oxide production in osteocytes
Masaaki Murata

Study of conditions for inducing neuronal differentiation of mouse-derived embryonal carcinoma cell: Toward analysis fo neuronal cell motility
Kensuke Suzuki

Investigation of geometric structures of microcontinuum dynamics
Hidetaka Yamaoka

Biomechanics of trabecular bone remodeling induced by osteocytic response to interstitial fluid flow
Yoshitaka Kameo

Remodeling simulation of cancellous bone in human vertebral body
Takanobu Minami

The role of mechanical factors in the lamellipodial protrusion dynamics in migrating cells
Masuzo Nagasaki

Brownian dynamics simulaiton of membrane protrusion driven by actin polymerization
Takeji Deji

Polar character evaluated in fluctuations of actin filament
Ryotaro Sabe

NO Production site and localization of caveolae in stimulated osteocytes
Kazuki Ishibashi


(c) 2011-2022 Department of Biosystems Science, Institute for Life and Medical Sciences, Kyoto University